Apartments, schools, retail space and a waterfront park are in the works for the Village.
More than 300 tenants still have belongings inside the Atlantic Avenue facility, the company said.
A secret meeting was held between the Manhattan Borough President and Atlas Capital.
StorageMart, which occupies one of seven buildings seized by the state, said tenants must go by Dec. 18.
The Empire State Development Corporation has filed an eminent domain petition in Brooklyn Supreme Court.
Assemblywoman Nicole Malliotakis asked for the money from the Empire State Development Corporation.
The company's headquarters has been in Brooklyn for 15 years.
The deal between the state and the Hudson River Park Trust has angered local elected officials.
The state is looking to sell off 1.5 million square feet of air rights from the station.
Columbia claims to have exceeded minority hiring and spending goals, but critics are skeptical.
The board says Columbia is not living up to goals it agreed to during negotiations for its expansion.
Some local leaders say the state may be playing politics with the proposal.
The parking garage at 121 West 125th St. is slated to also have cultural exhibition space.
Group says they want to prevent eminent domain from being used.
The redeveloped Victoria Theater on 125th Street, which dates to 1917, will include a hotel, residential rentals and office and community space.
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